Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Research, vol.25, issue.17, pp.3389-3402, 1997. ,
DOI : 10.1093/nar/25.17.3389
Terminal proteins essential for the replication of linear plasmids and chromosomes in Streptomyces, Genes & Development, vol.15, issue.12, pp.1518-1527, 2001. ,
DOI : 10.1101/gad.896201
The Aminonucleoside Antibiotic A201A is Inactivated by a Phosphotransferase Activity from Streptomyces Capreolus NRRL 3817, the Producing Organism. Isolation and Molecular Characterization of the Relevant Encoding Gene and its DNA Flanking Regions, European Journal of Biochemistry, vol.1, issue.1, pp.54-63, 1997. ,
DOI : 10.1016/0378-1119(85)90120-9
Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives, Gene, vol.102, issue.1, pp.75-78, 1991. ,
DOI : 10.1016/0378-1119(91)90541-I
SCP1, a 356,023 bp linear plasmid adapted to the ecology and developmental biology of its host, Mol. Microbiol, vol.51, issue.2, pp.1615-1628, 2004. ,
Recombination between the linear plasmid pPZG101 and the linear chromosome of Streptomyces rimosus can lead to exchange of ends, Molecular Microbiology, vol.76, issue.6, pp.1165-1176, 1998. ,
DOI : 10.1016/0378-1119(85)90120-9
Une nouvelle espèce de Streptomyces productrice d'antibiotiques: Streptomyces ambofaciens n. sp. caractères culturaux, Ann. Inst. Pasteur (Paris), vol.87, pp.702-707, 1954. ,
Base composition bias might result from competition for metabolic resources, Trends in Genetics, vol.18, issue.6, pp.291-294, 2002. ,
DOI : 10.1016/S0168-9525(02)02690-2
Differential and Cross-Transcriptional Control of Duplicated Genes Encoding Alternative Sigma Factors in Streptomyces ambofaciens, Journal of Bacteriology, vol.186, issue.16, pp.5355-5365, 2004. ,
DOI : 10.1128/JB.186.16.5355-5365.2004
URL : https://hal.archives-ouvertes.fr/hal-01659043
Invertrons, a class of structurally and functionally related genetic elements that includes linear DNA plasmids, transposable elements, and genomes of adeno-type viruses, Microbiol. Rev, vol.54, pp.66-74, 1990. ,
Separate and Coordinate Transcriptional Control Mechanisms Link Expression of the Potentially Lethal KilB Spread Locus to the Upstream Transmission Operon on Streptomyces Plasmid pIJ101, Journal of Molecular Biology, vol.334, issue.5, pp.875-884, 2003. ,
DOI : 10.1016/j.jmb.2003.10.014
Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4, Environmental Microbiology, vol.60, issue.2, pp.334-346, 2006. ,
DOI : 10.1046/j.1365-2958.2002.02760.x
SANK95570 plasmids pSV1 and pSV2, FEMS Microbiology Letters, vol.213, issue.1, pp.87-92, 2002. ,
DOI : 10.1111/j.1574-6968.2002.tb11290.x
A probabilistic method for identifying start codons in bacterial genomes, Bioinformatics, vol.17, issue.12, pp.1123-1130, 2001. ,
DOI : 10.1093/bioinformatics/17.12.1123
The COG database: new developments in phylogenetic classification of proteins from complete genomes, Nucleic Acids Research, vol.29, issue.1, pp.22-28, 2001. ,
DOI : 10.1093/nar/29.1.22
Chromosomal Arm Replacement in Streptomyces griseus, Journal of Bacteriology, vol.185, issue.3, pp.1120-1124, 2003. ,
DOI : 10.1128/JB.185.3.1120-1124.2003
A new beginning with new ends: linearisation of circular chromosomes during bacterial evolution, FEMS Microbiology Letters, vol.186, issue.2, pp.143-150, 2000. ,
DOI : 10.1111/j.1574-6968.2000.tb09095.x
Genome plasticity in Streptomyces: identification of 1 Mb TIRs in the S. coelicolor A3(2) chromosome, Mol. Microbiol, vol.51, pp.1535-1550, 2004. ,
Intragenomic and intraspecific polymorphism of the 16S???23S rDNA internally transcribed sequences of Streptomyces ambofaciens, Microbiology, vol.148, issue.3, pp.633-642, 2002. ,
DOI : 10.1099/00221287-148-3-633
End-to-end fusion of linear deleted chromosomes initiates a cycle of genome instability in Streptomyces ambofaciens, Molecular Microbiology, vol.88, issue.1955, pp.411-425, 2003. ,
DOI : 10.1099/00221287-148-3-633
URL : https://hal.archives-ouvertes.fr/hal-01659028
Two Chimeric Chromosomes of Streptomyces coelicolor A3(2) Generated by Single Crossover of the Wild-Type Chromosome and Linear Plasmid SCP1, Journal of Bacteriology, vol.186, issue.19, pp.6553-6559, 2004. ,
DOI : 10.1128/JB.186.19.6553-6559.2004
InterProScan - an integration platform for the signature-recognition methods in InterPro, Bioinformatics, vol.17, issue.9, pp.847-848, 2001. ,
DOI : 10.1093/bioinformatics/17.9.847