The RNA Modification Database: 1999 update, Nucleic Acids Research, vol.27, issue.1, pp.196-197, 1999. ,
DOI : 10.1093/nar/27.1.196
URL : https://academic.oup.com/nar/article-pdf/27/1/196/4063413/27-1-196.pdf
rRNA modifications and ribosome function, Trends in Biochemical Sciences, vol.27, issue.7, pp.344-351, 2002. ,
DOI : 10.1016/S0968-0004(02)02109-6
Ribosome Structure and Activity Are Altered in Cells Lacking snoRNPs that Form Pseudouridines in the Peptidyl Transferase Center, Molecular Cell, vol.11, issue.2, pp.425-435, 2003. ,
DOI : 10.1016/S1097-2765(03)00040-6
Effects of nucleotide substitution and modification on the stability and structure of helix 69 from 28S rRNA, RNA, vol.11, issue.9, pp.1420-1429, 2005. ,
DOI : 10.1261/rna.2320605
A snoRNA that guides the two most conserved pseudouridine modifications within rRNA confers a growth advantage in yeast, RNA, vol.9, issue.7, pp.771-779, 2003. ,
DOI : 10.1261/rna.5240503
Unique structural and stabilizing roles for the individual pseudouridine residues in the 1920 region of Escherichia coli 23S rRNA, Nucleic Acids Research, vol.28, issue.10, pp.2075-2083, 2000. ,
DOI : 10.1093/nar/28.10.2075
The Archaeon Haloarcula marismortui has Few Modifications in the Central Parts of its 23S Ribosomal RNA, Journal of Molecular Biology, vol.348, issue.3, pp.563-573, 2005. ,
DOI : 10.1016/j.jmb.2005.03.009
Number, position, and significance of the pseudouridines in the large subunit ribosomal RNA of Haloarcula marismortui and Deinococcus radiodurans, RNA, vol.11, issue.2, pp.210-219, 2005. ,
DOI : 10.1261/rna.7209905
Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing, The EMBO Journal, vol.17, issue.19, pp.5783-5795, 1998. ,
DOI : 10.1093/emboj/17.19.5783
Pseudouridine Synthases, Chemistry & Biology, vol.13, issue.11, pp.1125-1135, 2006. ,
DOI : 10.1016/j.chembiol.2006.09.009
URL : https://doi.org/10.1016/j.chembiol.2006.09.009
Purification, structure, and properties of Escherichia coli tRNA pseudouridine synthase I, J. Biol. Chem, vol.263, pp.2255-2263, 1988. ,
Purification, cloning, and properties of the tRNA Psi 55 synthase from Escherichia coli, RNA, vol.1, pp.102-112, 1995. ,
Purification, cloning, and properties of the 16S RNA pseudouridine 516 synthase from Escherichia coli, Biochemistry, vol.34, issue.27, pp.8904-8913, 1995. ,
DOI : 10.1021/bi00027a043
A dual-specificity pseudouridine synthase: An Escherichia coli synthase purified and cloned on the basis of its specificity for É746 in 23S RNA is also specific for É32 in tRNA phe, RNA, vol.1, pp.437-448, 1995. ,
Pseudouridine Synthases: Four Families of Enzymes Containing a Putative Uridine-Binding Motif Also Conserved in dUTPases and dCTP Deaminases, Nucleic Acids Research, vol.24, issue.12, pp.2411-2415, 1996. ,
DOI : 10.1093/nar/24.12.2411
A novel unanticipated type of pseudouridine synthase with homologs in bacteria, archaea, and eukarya, RNA, vol.9, issue.6, pp.711-721, 2003. ,
DOI : 10.1261/rna.5230603
The Saccharomyces cerevisiae U2 snRNA:pseudouridine-synthase Pus7p is a novel multisite-multisubstrate RNA:??-synthase also acting on tRNAs, RNA, vol.9, issue.11, pp.1371-1382, 2003. ,
DOI : 10.1261/rna.5520403
Crystal structure of the catalytic domain of RluD, the only rRNA pseudouridine synthase required for normal growth of Escherichia coli, RNA, vol.10, issue.2, pp.231-239, 2004. ,
DOI : 10.1261/rna.5187404
Crystal Structure of TruD, a Novel Pseudouridine Synthase with a New Protein Fold, Journal of Biological Chemistry, vol.10, issue.18, pp.18107-18110, 2004. ,
DOI : 10.1107/S0907444999010495
Critical Aspartic Acid Residues in Pseudouridine Synthases, Journal of Biological Chemistry, vol.11, issue.32, pp.22225-22230, 1999. ,
DOI : 10.1017/S1355838298980761
URL : http://www.jbc.org/content/274/32/22225.full.pdf
16S ribosomal RNA pseudouridine synthase RsuA of Escherichia coli: Deletion, mutation of the conserved Asp102 residue, and sequence comparison among all other pseudouridine synthases, RNA, vol.5, issue.6, pp.761-763, 1999. ,
DOI : 10.1017/S1355838299990167
Ribosomal RNA and tRNA Pseudouridine Synthase RluA, Journal of Biological Chemistry, vol.171, issue.27, pp.18880-18886, 1999. ,
DOI : 10.1073/pnas.89.9.3995
RNA-modifying enzymes, Current Opinion in Structural Biology, vol.13, issue.1, pp.49-55, 2003. ,
DOI : 10.1016/S0959-440X(02)00002-7
Novel Predicted RNA-Binding Domains Associated with the Translation Machinery, Journal of Molecular Evolution, vol.48, issue.3, pp.291-302, 1999. ,
DOI : 10.1007/PL00006472
Crystal structure determination and site-directed mutagenesis of the Pyrococcus abyssi aCBF5-aNOP10 complex reveal crucial roles of the C-terminal domains of both proteins in H/ACA sRNP activity, Nucleic Acids Research, vol.34, issue.3, pp.826-839, 2006. ,
DOI : 10.1093/nar/gkj482
The Cbf5???Nop10 complex is a molecular bracket that organizes box H/ACA RNPs, Nature Structural & Molecular Biology, vol.148, issue.12, pp.1101-1107, 2005. ,
DOI : 10.1016/j.jsb.2004.06.010
Crystal Structure of a Cbf5-Nop10-Gar1 Complex and Implications in RNA-Guided Pseudouridylation and Dyskeratosis Congenita, Molecular Cell, vol.21, issue.2, pp.249-260, 2006. ,
DOI : 10.1016/j.molcel.2005.11.017
Crystal structure of an H/ACA box ribonucleoprotein particle, Nature, vol.100, issue.7109, pp.302-307, 2006. ,
DOI : 10.1073/pnas.2135585100
Cocrystal Structure of a tRNA ??55 Pseudouridine Synthase, Cell, vol.107, issue.7, pp.929-939, 2001. ,
DOI : 10.1016/S0092-8674(01)00618-3
The expanding snoRNA world, Biochimie, vol.84, issue.8, pp.775-790, 2002. ,
DOI : 10.1016/S0300-9084(02)01402-5
Small Nucleolar RNAs, Cell, vol.109, issue.2, pp.145-148, 2002. ,
DOI : 10.1016/S0092-8674(02)00718-3
RNA-modifying machines in archaea, Molecular Microbiology, vol.292, issue.3, pp.617-629, 2003. ,
DOI : 10.1128/MCB.12.6.2561
URL : http://onlinelibrary.wiley.com/doi/10.1046/j.1365-2958.2003.03483.x/pdf
RNA-Guided RNA modification: functional organization of the archaeal H/ACA RNP, Genes & Development, vol.19, issue.10, pp.1238-1248, 2005. ,
DOI : 10.1101/gad.1309605
Reconstitution of archaeal H/ACA small ribonucleoprotein complexes active in pseudouridylation, Nucleic Acids Research, vol.33, issue.10, pp.3133-3144, 2005. ,
DOI : 10.1093/nar/gki630
URL : https://hal.archives-ouvertes.fr/hal-01662780
Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA, RNA, vol.12, issue.1, pp.40-52, 2006. ,
DOI : 10.1261/rna.2221606
URL : https://hal.archives-ouvertes.fr/hal-00109511
Binding of L7Ae protein to the K-turn of archaeal snoRNAs: a shared RNA binding motif Nucleic Acids Research, p.5623, 2003. ,
Structure of Protein L7Ae Bound to a K-Turn Derived from an Archaeal Box H/ACA sRNA at 1.8 ?? Resolution, Structure, vol.12, issue.5, pp.893-903, 2004. ,
DOI : 10.1016/j.str.2004.03.015
Formation of the conserved pseudouridine at position 55 in archaeal tRNA, Nucleic Acids Research, vol.34, issue.15, pp.4293-4301, 2006. ,
DOI : 10.1093/nar/gkl530
Reconstitution of Archaeal H/ACA sRNPs and Test of their Activity, Methods Enzymol, vol.425, pp.389-405, 2007. ,
DOI : 10.1016/S0076-6879(07)25016-5
Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: Analysis by the application of a new sequencing technique, Biochemistry, vol.32, issue.37, pp.9754-9762, 1993. ,
DOI : 10.1021/bi00088a030
Secondary structure of the yeast Saccharomyces cerevisiae pre-U3A snoRNA and its implication for splicing efficiency, RNA, vol.2, pp.1079-1093, 1996. ,
Identification of Modified Residues in RNAs by Reverse Transcription???Based Methods, Methods Enzymol, vol.425, pp.21-53, 2007. ,
DOI : 10.1016/S0076-6879(07)25002-5
Solution Structure of an rRNA Substrate Bound to the Pseudouridylation Pocket of a Box H/ACA snoRNA, Molecular Cell, vol.26, issue.2, pp.205-215, 2007. ,
DOI : 10.1016/j.molcel.2007.03.014
H/ACA small nucleolar RNA pseudouridylation pockets bind substrate RNA to form three-way junctions that position the target U for modification, Proc. Natl Acad. Sci. USA, pp.6655-6660, 2007. ,
DOI : 10.1016/0263-7855(96)00009-4
Complete crystallographic analysis of the dynamics of CCA sequence addition, Nature, vol.54, issue.7114, pp.956-960, 2006. ,
DOI : 10.1107/S0907444998003254
Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins, The EMBO Journal, vol.19, issue.8, pp.1857-1867, 2004. ,
DOI : 10.1038/sj.emboj.7600181
Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit, Proc. Natl Acad. Sci. USA, pp.12648-12653, 2003. ,
DOI : 10.1093/protein/8.2.127
Can Abolish In Vivo Pseudouridylation of rRNA, Molecular and Cellular Biology, vol.19, issue.11, pp.7461-7472, 1999. ,
DOI : 10.1128/MCB.19.11.7461
Pseudouridine-guide RNAs and other Cbf5p-associated RNAs in Euglena gracilis, RNA, vol.10, issue.7, pp.1034-1046, 2004. ,
DOI : 10.1261/rna.7300804